Improving the measurement of cyanogenic glycosides in flaxseed
Oilseeds Program

Dr. Véronique J. Barthet
Research scientist/program manager
Oilseeds
veronique.barthet@grainscanada.gc.ca
Team members
Research scientist/program manager
- Dr. Véronique J. Barthet
Chemists
- Ann Puvirajah
- Tao Fan
Technicians
- Dr. Anna Chepurna
- Brad Speiss
- Faye Arevalo (Harvest Sample Program)
- Hayeon Oh
- Marnie McLean
- Nicole Pogorzelec
- Katharine Schulz (retired March 2023)
- Ololade Oni (Harvest Sample Program)
Student
- Arina Sherstyuk
The Oilseeds Program conducts research on Canadian oilseeds such as canola, rapeseed, flaxseed, soybean and mustard seed. We assess the effects of grading factors on oilseed quality and analyze how the biochemical components of oilseeds affect their quality and the products made from them. Another important part of our work is assessing and developing methods used to analyze oilseed quality. This includes validating our reference methods to international standards, developing models to predict oilseed quality using near infra-red spectroscopy, and pioneering and validating our own methods to analyze minor seed compounds. The Oilseeds Program also evaluates the quality of oilseeds in samples from the Harvest Sample Program and export shipments.
Cyanogenic glycosides in flaxseed
We analyze minor compounds in oilseeds because they can have physiological importance or can be perceived as negatively affecting health. One group of minor compounds that our lab studies in flaxseed is cyanogenic glycosides. There are about 75 known cyanogenic glycosides in more than 2,500 plant species and they can be found in an entire plant or just in certain structures such as roots or seeds. Although cyanogenic glycosides occur in low levels in flaxseed, they are a concern because hydrogen cyanide (HCN), a well-known toxin, is released when they break down through hydrolysis. HCN is only released if the plant or seed tissues are damaged and the enzymes responsible for hydrolysis come into contact with the cyanogenic glycosides.
The European Union and Japan have set limits on the total amount of cyanogenic glycosides allowed in flaxseed that is used in food products and feed. In Canada and the United States flaxseed is considered safe for consumption and numerous studies have documented its health benefits due to the presence of alpha-linolenic acid (an omega-3 fatty acid), fiber and lignans.
Traditional methods for measuring cyanogenic compounds
Two cyanogenic diglycosides, linustatin and neolinustatin, are found in sound (undamaged) flaxseeds and two cyanogenic monoglycosides, linamarin and lotaustralin, are found in seedlings, developing plants, flowers, damaged seeds and immature seeds (Figure 1). The traditional method for analyzing these compounds measures the amount of HCN produced after the cyanogenic glycosides are hydrolyzed. To be accurate, this method requires the complete hydrolysis of the cyanogenic glycosides and the compete capture of the HCN produced. Hydrolysis may be incomplete, however, if the acids or enzymes being used to cause hydrolysis interact with other compounds or are not specific to the cyanogenic glycosides being hydrolyzed. For example, flaxseed cyanogenic glycosides need two active enzymes in sequence to be hydrolyzed and using only one will lead to almost no HCN production. This traditional method gives highly variable results with very low reproducibility.
A better approach to the analysis of cyanogenic glycosides is to quantify the intact cyanogenic compounds. An accurate high pressure liquid chromatography (HPLC) method for this has been reported in the scientific literature, but the method is very long as several steps are necessary to improve the detection limit.
Analytical improvements
Our team has been working to improve the analysis of cyanogenic glycosides in flaxseeds and to develop an accurate, repeatable and reproducible method to measure them. We first were able to lower the detection limit using gas chromatography (GC) with flame ionization detection (FID) instead of HPLC. We also improved the extraction of cyanogenic glycosides from seeds and then developed a GC-mass spectrometry (GC-MS) method to analyze baked products which further decreased the limit of detection. We also found that one of the cyanogenic monoglycosides was not commercially available in its natural form, so we developed a method to obtain pure compounds to use as reference material, which led to an improvement in the quantification of cyanogenic monoglycosides.
Comparison study with Health Canada
The Oilseeds team was also involved in a project with Health Canada that compared our GC-MS method with a liquid chromatography-mass spectrometry (LC-MS) method used to directly quantify cyanogenic glycosides. Although they can be cost prohibitive, LC-MS methods are often considered to be the best since compounds are analyzed directly without transformation into a gaseous state. They are also very specific since the mass spectra allow compounds to be identified.
The results of the study (Table 1) show that our GC-MS method has very good reproducibility with the relative standard deviation (RSD) of analysis being 0.90%. A comparison of the GC-MS and LC-MS results showed no statistical difference between the two methods. These results indicated that the analysis of intact cyanogenic glycosides should be the method of choice for their quantification.
Statistical measureFootnote 1 | LC-MS results | GC-MS results |
---|---|---|
Average | 306.82 | 283.44 |
Median | 285.20 | 277.22 |
Maximum | 657.20 | 404.46 |
Minimum | 128.42 | 109.36 |
Table 1 Notes
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Recent publications
- Fan, T. and V.J. Barthet. 2018, Nov. 29-Dec. 1. Development of GC/MS methods for the quantification of cyanogenic glycoside in breads with flaxseed. Poster session presented at: Lake Louise XXXI. 31st Workshop on Tandem Mass Spectrometry; Lake Louise, AB, CA.
- Barthet, V.J. and T. Fan. 2018, May 6-9. Purification of cyanogenic glycosides from flaxseeds. Poster session presented at: 2018 AOCS Annual Meeting & Expo; Minneapolis, MN, USA.
- T. Fan and V.J. Barthet. 2016, June 5-9. Analysis of trimethylsilyl derivatives of cyanogenic glycosides from flaxseed (Linum usitatissimum) by GC/MS. Abstract in Proceedings of the 64th ASMS Conference on Mass Spectrometry and Allied Topics; San Antonio, TX, USA.
- Barthet, V.J. and R. Bacala. 2010. Development of optimized extraction methodology for cyanogenic glycosides from flaxseed (Linum usitatissimum). J. AOAC Int. 93(2): 478-484. https://doi.org/10.1093/jaoac/93.2.478
- Bacala, R. and V.J. Barthet. 2007. Development of extraction and gas chromatography analytical methodology for cyanogenic glycosides in flaxseed (Linum usitatissimum). J. AOAC Int. 90(1): 153-161. https://doi.org/10.1093/jaoac/90.1.153
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